5th International Conference on the Long and the Short of Non-Coding RNAs

Posters

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49 Aberrant 3’UTR processing regulates leukaemia differentiation
Eric Wang1, Cuijuan Han1, Alexander Calderon1, Abimbola Lawal1, Sadik Karma1, Sakthi H Rajendran1, and Iannis Aifantis
50 The non-coding vault RNAs – key players in the regulation of the breast cancer cells response to doxorubicin and cisplatin
Magdalena Taube, Katarzyna Kasprzyk, and Błażej Rubiś
51 High association of rDNA-contacting developmental genes with lincRNAs suggests theirs’ possible targeting role
Nickolai A. Tchurikov, Elena S. Klushevskaya, Ildar R. Alembekov, Antonina N. Kretova, Viktoriya N. Lukicheva, Oliviia D. Managarova, Vladimir R. Chechetkin, and Yuri V. Kravatsky
52 The methylation landscape of cancer-relevant microRNA genes
Ari Meerson1,2, Tiferet Shindler2, Yuval Shahak2, Rahaf Salalha2, and Snait Tamir1,2
53 Identification and functional characterization of a long non-coding RNA-encoded microprotein MKMP78 based on peptide evidence, localisation and protein interactome.
Nikita S Dewani1, Masatoshi Kanda2, and Norbert Hübner1
54 Discovery of Dinucleoside Diphosphates Acting as 5' RNA Caps in Mammalian Cells
Maria Bianca Mititelu, Ondřej Nešuta, and Hana Cahova
55 Tumor suppressor miR-137 in epigenetic regulatory mechanisms in ovarian carcinoma
Svetlana S. Lukina1, Leonid L. Uroshlev2, Danila M. Zaichenko1, Marina V. Fridman2, Alexey M. Burdennyy1, Vitaly I. Loginov1, Alexey A. Moskovtsev1, and Eleonora A. Braga1
56 A group of aberrantly expressed microRNAs in the development of targeted therapy for clear cell renal cell cancer
Irina V. Pronina, Svetlana S. Lukina, Alexey M. Burdennyy, and Vitaly I. Loginov
57 The interplay between alternative polyadenylation and microRNAs in the regulation of an oncogenic transcription factor
Giulia Pagani, Stefania Fornezza, Chiara Casirati, Cecilia Pandini, and Paolo Gandellini
58 A role for miR-4734 in conditional suppression of ER stress-associated proinflammatory responses
Dan Michael1,2, Moshe Oren2, Igor Ulitsky3, Ester Feldmesser5, Nadav Hen2, and Amir Argoettie4
59 Deep sequencing of tissue microRNAs in pediatric inflammatory bowel disease patients
Tereza Deissova1, Dagmar Al Tukmachi1, Julia Bohosova1, Tana Machackova1, Leos Kren2, Petr Jabandziev1,3, Matej Hrunka3, Tereza Pinkasova3, and Ondrej Slaby1,4
60 Exploring the role of the piRNA pathway in microglia and neuroinflammation
Lidia Giantomasi1, Silvia Beatini1, Kiril Tuntevski1,2, Roberta Pelizzoli1, Remo Sanges3,4, and Davide De Pietri Tonelli1
61 Sequencing of circulating microRNAs in pediatric patients with idiopathic scoliosis
Jana Orlickova1,3, Michael Lujc2, Michal Galko2, Dagmar Al Tukmachi1, Tereza Deissova1, Milan Filipovic2, Martin Repko2, Ondrej Slaby1, and Tana Machackova1
62 Inhibition of piR-9491 expression in glioblastoma stem cells decreases viability, invasivity and promotes apoptosis
Frantisek Siegl1, Elena Garcia Borja2, Rosana Mateu Sanz2, Karolina Trachtova1, Petr Busek2, and Jiri Sana1,3,4
63 defining the Epstein Barr Virus derived miRNA landscape and its implications for the pathogenesis of Hodgkin Lymphoma.
Nohora J. Rueda-Forero1,2, Anke Van den BERG1, Joost Kluiver1, and Arjan Diepstra1
64 Reverse Transcriptase Fingerprint Method for RNA caps detection
Flaminia Mancini1, Nikolas Tolar2, and Hana Cahova1
65 Regulation of exon exchange splicing by lncRNA Platr26 in cardiogenesis
Yi-Hsuan Lin
66 Dissecting the Mechanism of piRNA Biogenesis and Function in Adult Somatic Stem Cells of the Murine Hippocampal Niche
Kiril Tuntevski1,2, Silvia Beatini1, Lidia Giantomasi1, Caterina Gasperini1, Roberta Pelizzoli1, Rosa M Cossu3, Remo Sanges3,4, Stefano Gustincich3, and Davide De Pietri Tonelli1
67 Function and molecular interactions of circular RNAs with altered expression in KMT2A::AFF1 (MLL::AF4) ALL
Ilias Glogovitis1, Enrico Gaffo1, Roberto Merlo1, Joost Kluiver2, Anke Van Den Berg2, Danilo Tarantino4, Simone Romagnoli4, Niccolò Bartalucci4, Alessandro M Vannucchi4, Silvia Bresolin3, and Stefania Bortoluzzi1
68 Mechanism of immune-regulation by the lncRNA LUCAT1 in humans
Harshavardhan Janga
69 Dysregulation of ion channel genes via transcriptional adaptation, an RNA feedback loop, may lead to the worsening of the Brugada syndrome phenotype
Brian Juvik, Christopher M Dooley, Gabrielius Jakutis, and Didier YR Stainier
70 The circular RNA landscape in B-cell lymphoma
Xing Zhao3, Marieke Vromman1, Marcin P Sajek3, Jasper Verwilt1, Philippe Decruyenaere1, Tomasz Wozniak3, Maciej Giefing3, Agnieszka Dzikiewicz-Krawczyk3, Pieter-Jan Volders1, Jo Vandesompele1, Anke van den Berg3, and Joost Kluiver3
71 Pleiotropic functions of miR-31 in the regulation of sensitivity to conventional chemotherapy and radiotherapy in poor prognosis cancers.
David Hackett1, Jason McGrath3, Hannah L Moody4, Ralf A Hilger2, Rebecca M O'Brien1, Andrew D Sheppard1, Viviana Salvatore1, Martin P Barr5, Laura E Kane1, Laure Marignol6, John V Reynolds7, Niamh Lynam-Lennon1, and Stephen G Maher1
72 MiR-29a: new kid on the immuno-block
Xuebing Leng1, Lance A Buchness1, Christine I Rafie1, Svetlana Ristin1, Natasha K Khatwani1, Miguel A Gallardo1, Yuguang Ban2, Yuande Tan2, Aristeidis Telonis3, Alejandro Villarino1, Eli Gilboa1, and Erietta Stelekati1
73 LncRNA SFTA1P is a biomarker in the promotion of cervical cancer progression
lesetja Motadi and Mpho Choene
74 A functional characterization of long non-coding RNAs in breast cancer cells using multiple orthogonal approaches
Chiara Finocchiaro1, Bianca Giuliani1, Matteo J Marzi1, Francesco Nicassio1, Michael Hannus2, and Andrew Walsh2
75 A role for mitochondrial tRNAs in inter-organellar mito-nuclear communication.
sohail F. Tavazoie, Chris Rouya, and King Faisal Yambire
76 miRNA High-throughput Screening Reveals the Role of miR-590-3p in CD30 Expression and Brentuximab Vedotin Resistance in Hodgkin Lymphoma
Yujia Pan
77 Deciphering transcription factor dynamics with interpretation of Deep Learning modeling of experimental data
Georgios Georgakilas1,2, Panagiotis Ksiropotamos3, Zissimos Mourelatos2, and Theodore Dalamagas1
78 Unraveling the role of exoribonucleases in Campylobacter jejuni, an important foodborne pathogen
Vanessa G Costa1, Nabila Haddad2, Luís G Gonçalves1, Ana V Coelho1, Cecília M Arraiano1, and Rute G Matos1
79 Therapeutic potential and regulatory network of tumor suppressing miRNAs in angiosarcoma
Annaleigh Benton, Bozhi Liu, and Jason Hanna
80 Exploring activity and substrate specificity of Dis3L2 ribonuclease
Susana M. Costa1, Rute G. Matos1, Garg Ankur4, Leemor Joshua-Tour2,3,4, Cecília M. Arraiano1, and Sandra C. Viegas1
81 Stress adaptation mechanisms via a mitochondria-encoded non-coding RNA
Anna Blumental-Perry1 and Maria Hatzoglou2
82 A therapeutically targetable positive feedback loop between lnc-HLX-2-7, HLX, and MYC that promotes group 3 medulloblastoma
Keisuke Katsushima1, Kandarp Joshi1, Menglang Yuan1, Stacie Stapleton2, George Jallo2, Sudipta Seal3, Olivier Saulnier4, Michael D Taylor5, Robert J Wechsler-Reya6, Charles G Eberhart7, and Ranjan J Perera1
83 KDM7A-DT induces genotoxic stress, tumorigenesis, and progression of p53 missense mutation-associated invasive breast cancer
Antonis Giannakakis1,2, Margaritis Tsifintaris1, Vasileios Gouzouasis1, Ghim Siong Ow2, Mei Yee Aau2, Csaba Papp3, Anna V. Ivshina2, and Vladimir A. Kuznetsov2,3
84 Protein condensation by LincRNAs Enables germline differentiation
Roni Falk, Oren Ram, and Yonatan B Tzur
85 New Frontiers in CRISPR-Cas Biology – RNA-guided Proteases and Ancestorial Cas9s in Transposons
Chunyi Hu, Gabriel Schuler, and Ailong Ke
86 Maturation of microRNAs targeting alpha-synuclein in Parkinson's disease
Pascale Legault1, William Gauthier-Naud2, Alix Salvail-Lacoste1, Geneviève Di Tomasso1, Nicolas Giguère2, Andrew Park3, Janelle Drouin-Ouellet3, and Louis-Éric Trudeau2
87 Distinct circular RNA expression profiles in pediatric posterior fossa ependymomas
Ulvi Ahmadov1, Charlotte Udengaard1, Kim-Gwendolyn Dietrich1, Astrid Sehested2, Jørgen Kjems3,4, Helle Broholm5, and Lasse Kristensen1
88 3' end dynamics in LINE-1 retrotransposon biology
Zbigniew Warkocki
89 Transposons, a selfish friend in mammalian preimplantation development
Lin He
90 Valorizing faba bean towards anti-nutritional compounds free plant-based protein to replace Soya via CRISPR/Cas approach for food and animal feed supplements.
Rupesh Kumar Singh, Henrique Trinidade, and João Ricardo Sousa
91 Deciphering scaffolding roles on non-coding RNAs in protein condensation
Gian Gaetano Tartaglia
92 MOV10 regulates coding and ncRNA metabolism through uridylation-mediated mechanism
Zbigniew Warkocki1, Natalia Szóstak1, Arkadiusz Kajdasz1, Lidia Lipinska-Zubrycka, Martyna Kordys1, Anna Philips1, and Michał Małecki
93 Revealing the Biology of Long Non-Coding RNAs Through Discovery of Their Interacting Proteins
Leeza M Santiago Millan1, Urara Tomita2, Eleni Anastasakou2, and Kushani Shah2
94 Identification of Galectin-3 as a novel potential prognostic/predictive biomarker and therapeutic target for cerebral cavernous malformation disease
SOUVIK KAR
95 LARP7 and MePCE are involved in the processing and trafficking of human telomerase RNA
Yu-Cheng Huang, Chi-Kang Tseng, and Tsai-Ling Kao
96 Unveiling the Role of LARP3 in Telomerase Assembly and Regulation
Tsai-Ling Kao, Yu-Cheng Huang, and Chi-Kang Tseng
97 LARP7 and MePCE are involved in the processing and trafficking of human telomerase RNA
Yu-Cheng Huang, Chi-Kang Tseng, and Tsai-Ling Kao
98 Loss of Lamin A leads to the nuclear translocation of AGO2 and compromised RNA interference
Vivian Lobo1,2, Iwona Nowak1,2, Carola Fernandez1,2, Ana Iris Correa Muler1,2, Jakub O. Westholm3, Hsiang-Chi Huang1,2, Ivo Fabrik4, Hang T Huynh1,2, Evgeniia Shcherbinina1,2, Melis Poyraz1,2, Anetta Härtlova2,5, Daniel Benhalevy6, Davide Angeletti5,7, and Aishe A. Sarshad1,2
99 Elucidating the catalytic and noncatalytic roles of human 18S rRNA methyltransferase EMG1 in protein translation
Heidi Elashal
100 Development of RNA-based therapy for telomere biology disorders
Chi-Kang Tseng, Tsai-Ling Kao, and Yu-Cheng Huang
101 What limits our understanding of RNA Binding Proteins in Post-Transcriptional Gene Regulation?
Orli Korchev, Gal Verbin, and Daniel Benhalevy
102 A NON-RADIOACTIVE, IMPROVED PAR-CLIP AND SMALL RNA CDNA LIBRARY PREPARATION PROTOCOL
Dimitrios Anastasakis and Markus Hafner